CDS

Accession Number TCMCG057C28638
gbkey CDS
Protein Id XP_018491791.1
Location complement(join(39595440..39595604,39595692..39595898,39595990..39596124,39596210..39596341,39596422..39596539,39596734..39596963,39597051..39597224,39597304..39597435,39597549..39597821,39597895..39597975,39598064..39598561))
Gene LOC108862226
GeneID 108862226
Organism Raphanus sativus

Protein

Length 714aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636289.1
Definition PREDICTED: long chain acyl-CoA synthetase 8 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description AMP-binding enzyme
KEGG_TC 4.C.1.1
KEGG_Module M00086        [VIEW IN KEGG]
KEGG_Reaction R01280        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC00014        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01004        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K01897        [VIEW IN KEGG]
EC 6.2.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00061        [VIEW IN KEGG]
ko00071        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01212        [VIEW IN KEGG]
ko02024        [VIEW IN KEGG]
ko03320        [VIEW IN KEGG]
ko04146        [VIEW IN KEGG]
ko04216        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04920        [VIEW IN KEGG]
map00061        [VIEW IN KEGG]
map00071        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01212        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03320        [VIEW IN KEGG]
map04146        [VIEW IN KEGG]
map04216        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04920        [VIEW IN KEGG]
GOs GO:0001676        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004467        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015645        [VIEW IN EMBL-EBI]
GO:0016405        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016877        [VIEW IN EMBL-EBI]
GO:0016878        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGATCCTCCAATGGCGACCAGCGAGTACGGACTCTCCACGATCATAGCAGGCGGAGTCGCCGCTCTACTAGTACCGATCCTGCTCTCCGTCGTGTTAACCGGAACCAAAAAGGGGAAGAAGAGAGGCGTTCCGGTGAAAGTAGGCGGCGAGGAAGGCTACGCGATGCGTCACGCTCGAGGTCCCGATCTCGTCGACGTCCCCTGGCCAGGAGCCACGACGATGGCCGCCTTGTTTGAGCAGGCTTGCAAGAAGTACTCGAGCAACCGGTTGCTCGGGACTAGGGAGTTTATAGACAAGGAGATCGTCACGTCGAGTGACGGCAGGAAGTTCGAGAAGCTTCATCTCGGGGAGTATCGGTGGCAGAGCTATGGAGAGGTCTTTGAACGTGTTTGTAACTTCGCCTCGGGGCTTGTTGGTGGTGTTGGACATAACGTTGATACTCGTGTCGCTATCTTTTCTGATACTCGTGCTGAGTGGTTTATCGCTTTTCAGGGATGTTTCAGGCAGAATTTAACTGTTGTTACTATCTATGCTTCTTTAGGAGAGGATGCTTTAATTTACTCACTCAATGAGACTCAAGTGTCGACCCTGATATGCGACTCAAAGCAACTCAAGAAGTTGTCTGCGATACAATCAAGCTTGAAGACTGTAAAGAACATTATTTACATTGAGGAAGATGGAGTTGAGGTTGCTTCTAGTGACGTGAATGGTCTTGGTGACATCACTGTTTCGTCCATCGCTGAAGTTGAGAAACTGGGGAAGGAGAAACCTGTTGAGCCGAGCTTTCCTTCCAAGAATGGAGTTGCTGTTATAATGTTTACCAGTGGTAGTACCGGTCTACCAAAGGGAGTTATGATTACCCACGGGAATCTAATCGGAACTGCTGCAGGAGTTATGAAGGTGATTCCAAAGCTGAATAAGAATGACGTGTATATTGCATATTTACCTTTGGCGCATGTGTTTGAGCTGGAAGCTGAGATTGTGGTCTTTACATGGGGTAGTGCCATCGGTTATGGCTCAGCAATGACTTTAACTGACACTTCAAATAAAATTAAGAAAGGAACCAAAGGAGATGTTTCAGTTCTAAACCCAACTCTCATGACTGCAGTTCCAGCTATTCTTGATCGTGTCCGTGAAGGAGTTCTTAAAAAGGTTGAGGAAAAGGGTGGCATGGCGAAGACTCTCTTTAACTTTGCTTACAATCGCCGGTTAGCAGCTGTGAACGGAAGTTGGTTTGGTGCCTGGGGTTTGGAGAAAATGTTTTGGGATACTCTAGTCTTCAAAAAAATACGCGCTGTGCTTGGAGGACGCATCCGATTTATGCTCGTTGGAGGGGCTCCTCTGTCTCCTGATTCGCAACGCTTCATCAATATCTGCATGGGGTCTCCAATCGGTCAAGGATATGGATTGACTGAAACGTGTGCTGGAGCTACGTTTTCTGAGTGGGACGACCCTACTGTTGGACGCGTGGGACCACCACTCCCATGTGGCTACATTAAGCTTGTTTCTTGGGAAGAAGGTGGCTATAGAGTTTCAGACAAACCAATGCCTCGAGGGGAGATTGTGGTAGGTGGTAACAGTGTAACAGCAGGTTACTTCAACAATCAAGAAAAAACAGATGAGGTTTACAAGGTTGATGAGAAGGGCACGAGGTGGTTTTACACAGGAGACATTGGGAGATTCCACCCGGATGGATGTCTTGAAGTTATTGACAGGAAGAAAGATATCGTTAAACTTCAACATGGGGAATATGTATCCCTTGGAAAGGTGGAGGCAGCTTTGGGTTCAAGCAATTACGTTGACAACATTATGGTACACGCAGACCCAATGAACAGCTACTGTGTCGCTCTTGTTGTACCATCACACGGAGCAATAGAGAAATGGGCAGAGGAAGCAGGAGTTAAATCCAGCGACGTCTCTGAGCTATGCGAGAACGGTGAAGCAGTCAAGGAGGTTCAACAATCTCTTACCAAGGCAGCAAAGGCGGCAAAGCTAGAAAAGTTTGAAATCCCAGCAAAGATAAAGTTATTGCCGGAGCCGTGGACACCAGAGTCGGGACTAGTGACAGCTGCTCTCAAAATAAAGAGGGAGCAAATAAAGGCAAAGTTCAAAGATGAACTCCACAAGCTGTATGCCTAA
Protein:  
MEDPPMATSEYGLSTIIAGGVAALLVPILLSVVLTGTKKGKKRGVPVKVGGEEGYAMRHARGPDLVDVPWPGATTMAALFEQACKKYSSNRLLGTREFIDKEIVTSSDGRKFEKLHLGEYRWQSYGEVFERVCNFASGLVGGVGHNVDTRVAIFSDTRAEWFIAFQGCFRQNLTVVTIYASLGEDALIYSLNETQVSTLICDSKQLKKLSAIQSSLKTVKNIIYIEEDGVEVASSDVNGLGDITVSSIAEVEKLGKEKPVEPSFPSKNGVAVIMFTSGSTGLPKGVMITHGNLIGTAAGVMKVIPKLNKNDVYIAYLPLAHVFELEAEIVVFTWGSAIGYGSAMTLTDTSNKIKKGTKGDVSVLNPTLMTAVPAILDRVREGVLKKVEEKGGMAKTLFNFAYNRRLAAVNGSWFGAWGLEKMFWDTLVFKKIRAVLGGRIRFMLVGGAPLSPDSQRFINICMGSPIGQGYGLTETCAGATFSEWDDPTVGRVGPPLPCGYIKLVSWEEGGYRVSDKPMPRGEIVVGGNSVTAGYFNNQEKTDEVYKVDEKGTRWFYTGDIGRFHPDGCLEVIDRKKDIVKLQHGEYVSLGKVEAALGSSNYVDNIMVHADPMNSYCVALVVPSHGAIEKWAEEAGVKSSDVSELCENGEAVKEVQQSLTKAAKAAKLEKFEIPAKIKLLPEPWTPESGLVTAALKIKREQIKAKFKDELHKLYA